Research workbench
AlphaFold monomer V2.0 prediction for NADH-ubiquinone oxidoreductase chain 1 (Q9B8D6)
Analyse AlphaFold monomer V2.0 prediction for NADH-ubiquinone oxidoreductase chain 1… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9B8D6
- Type
- protein
- Length
- 317 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x5881B09f2D8e743400698633641fc1cD2Ed2BE6F
- Molecule
- NADH-ubiquinone oxidoreductase chain 1
- UniProt
- Q9B8D6
- Pockets
- 5 · best druggability 0.81
Structure
1 distinct chain · 73% helix, 1% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | NADH-ubiquinone oxidoreductase chain 1 | protein | 317 | 73% helix, 1% strand | Q9B8D6 |
Pockets
5 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 168 | 0.81 | 0.97 | 32 | empty |
| 2 | 247 | 0.56 | 0.78 | 34 | empty |
| 3 | 110 | 0.42 | 0.76 | 15 | empty |
| 4 | 54 | 0.29 | 0.74 | 12 | empty |
| 5 | 54 | 0.27 | 0.73 | 15 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9B8D6
- Elsewhere: UniProt Q9B8D6 · AlphaFold DB Q9B8D6
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