Research workbench
AlphaFold monomer V2.0 prediction for NADH-ubiquinone oxidoreductase chain 1 (B0FWD8)
Analyse AlphaFold monomer V2.0 prediction for NADH-ubiquinone oxidoreductase chain 1… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B0FWD8
- Type
- protein
- Length
- 313 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x80D2ac0F5e3268bC5C1d28BBAA07E3169BB02b79
- Molecule
- NADH-ubiquinone oxidoreductase chain 1
- UniProt
- B0FWD8
- Pockets
- 5 · best druggability 0.82
Structure
1 distinct chain · 75% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | NADH-ubiquinone oxidoreductase chain 1 | protein | 313 | 75% helix, 0% strand | B0FWD8 |
Pockets
5 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 160 | 0.82 | 0.97 | 29 | empty |
| 2 | 273 | 0.55 | 0.76 | 31 | empty |
| 3 | 167 | 0.49 | 0.76 | 22 | empty |
| 4 | 89 | 0.35 | 0.74 | 13 | empty |
| 5 | 60 | 0.31 | 0.74 | 14 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B0FWD8
- Elsewhere: UniProt B0FWD8 · AlphaFold DB B0FWD8
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