Research workbench
AlphaFold monomer V2.0 prediction for nuclear pore complex protein NUP133 (Q9VCW3)
Analyse AlphaFold monomer V2.0 prediction for nuclear pore complex protein NUP133… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9VCW3
- Type
- protein
- Length
- 1,200 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xB44F19a0cb161828322eEEd13F55d4C3C34938d2
- Molecule
- Nuclear pore complex protein NUP133
- UniProt
- Q9VCW3
- Pockets
- 12 · best druggability 0.81
Structure
1 distinct chain · 43% helix, 17% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Nuclear pore complex protein NUP133 | protein | 1200 | 43% helix, 17% strand | Q9VCW3 |
Pockets
12 pockets found on a 1 Å grid, 5 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 950 | 0.81 | 0.83 | 81 | empty |
| 2 | 803 | 0.73 | 0.78 | 64 | empty |
| 3 | 346 | 0.65 | 0.80 | 54 | empty |
| 4 | 247 | 0.58 | 0.79 | 28 | empty |
| 5 | 162 | 0.53 | 0.79 | 23 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9VCW3
- Elsewhere: UniProt Q9VCW3 · AlphaFold DB Q9VCW3
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