Research workbench
AlphaFold monomer V2.0 prediction for DNA-binding transcriptional regulator ntrc (P0AFB9)
Analyse AlphaFold monomer V2.0 prediction for DNA-binding transcriptional regulator… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P0AFB9
- Type
- protein
- Length
- 469 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x2C80004E163f390bE973948991E01D5924a4fAC8
- Molecule
- DNA-binding transcriptional regulator ntrc
- UniProt
- P0AFB9
- Pockets
- 3 · best druggability 0.60
Structure
1 distinct chain · 49% helix, 13% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-binding transcriptional regulator ntrc | protein | 469 | 49% helix, 13% strand | P0AFB9 |
Pockets
3 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 393 | 0.60 | 0.76 | 41 | empty |
| 2 | 151 | 0.53 | 0.80 | 26 | empty |
| 3 | 60 | 0.31 | 0.75 | 14 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0AFB9
- Elsewhere: UniProt P0AFB9 · AlphaFold DB P0AFB9
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