Research workbench
AlphaFold monomer V2.0 prediction for DNA-binding transcriptional regulator ntrc (Q04848)
Analyse AlphaFold monomer V2.0 prediction for DNA-binding transcriptional regulator… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q04848
- Type
- protein
- Length
- 480 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x46EfCa788d03A3e879DAcDb96552AB8Bbc7e20b3
- Molecule
- DNA-binding transcriptional regulator ntrc
- UniProt
- Q04848
- Pockets
- 5 · best druggability 0.61
Structure
1 distinct chain · 47% helix, 12% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-binding transcriptional regulator ntrc | protein | 480 | 47% helix, 12% strand | Q04848 |
Pockets
5 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 363 | 0.61 | 0.77 | 33 | empty |
| 2 | 128 | 0.51 | 0.80 | 25 | empty |
| 3 | 100 | 0.43 | 0.78 | 17 | empty |
| 4 | 109 | 0.36 | 0.73 | 14 | empty |
| 5 | 68 | 0.31 | 0.74 | 15 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q04848
- Elsewhere: UniProt Q04848 · AlphaFold DB Q04848
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