Research workbench
AlphaFold monomer V2.0 prediction for 26S rRNA (cytosine-C(5))-methyltransferase nsun-5 (Q9NAA7)
Analyse AlphaFold monomer V2.0 prediction for 26S rRNA… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9NAA7
- Type
- protein
- Length
- 439 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xfD660B8b17eFc3817DC3dEbc53D47001872A2Ced
- Molecule
- 26S rRNA (cytosine-C(5))-methyltransferase nsun-5
- UniProt
- Q9NAA7
- Pockets
- 4 · best druggability 0.71
Structure
1 distinct chain · 47% helix, 14% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | 26S rRNA (cytosine-C(5))-methyltransferase nsun-5 | protein | 439 | 47% helix, 14% strand | Q9NAA7 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 897 | 0.71 | 0.76 | 68 | empty |
| 2 | 120 | 0.50 | 0.81 | 24 | empty |
| 3 | 63 | 0.44 | 0.82 | 14 | empty |
| 4 | 54 | 0.36 | 0.79 | 14 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9NAA7
- Elsewhere: UniProt Q9NAA7 · AlphaFold DB Q9NAA7
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