Research workbench
AlphaFold monomer V2.0 prediction for protein nodulation signaling pathway 1 (Q4VYC8)
Analyse AlphaFold monomer V2.0 prediction for protein nodulation signaling pathway 1… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q4VYC8
- Type
- protein
- Length
- 554 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x15040d7Bef412593c17C9A4149604C9C2A4788C7
- Molecule
- Protein nodulation signaling pathway 1
- UniProt
- Q4VYC8
- Pockets
- 9 · best druggability 0.66
Structure
1 distinct chain · 34% helix, 10% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Protein nodulation signaling pathway 1 | protein | 554 | 34% helix, 10% strand | Q4VYC8 |
Pockets
9 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 195 | 0.66 | 0.85 | 22 | empty |
| 2 | 499 | 0.65 | 0.77 | 41 | empty |
| 3 | 184 | 0.61 | 0.83 | 24 | empty |
| 4 | 103 | 0.54 | 0.84 | 25 | empty |
| 5 | 131 | 0.43 | 0.76 | 19 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q4VYC8
- Elsewhere: UniProt Q4VYC8 · AlphaFold DB Q4VYC8
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