Research workbench
AlphaFold monomer V2.0 prediction for protein nodulation signaling pathway 1 (A1DQP9)
Analyse AlphaFold monomer V2.0 prediction for protein nodulation signaling pathway 1… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A1DQP9
- Type
- protein
- Length
- 542 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x4d07E6a23DeB6B95bd9b90EcB67368b7e8D3B77e
- Molecule
- Protein nodulation signaling pathway 1
- UniProt
- A1DQP9
- Pockets
- 5 · best druggability 0.70
Structure
1 distinct chain · 35% helix, 11% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Protein nodulation signaling pathway 1 | protein | 542 | 35% helix, 11% strand | A1DQP9 |
Pockets
5 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 535 | 0.70 | 0.79 | 44 | empty |
| 2 | 474 | 0.68 | 0.79 | 69 | empty |
| 3 | 58 | 0.44 | 0.83 | 16 | empty |
| 4 | 65 | 0.39 | 0.79 | 13 | empty |
| 5 | 61 | 0.30 | 0.75 | 19 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A1DQP9
- Elsewhere: UniProt A1DQP9 · AlphaFold DB A1DQP9
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