Research workbench
AlphaFold monomer V2.0 prediction for NMDA receptor synaptonuclear signaling and neuronal migration factor (B8PYG1)
Analyse AlphaFold monomer V2.0 prediction for NMDA receptor synaptonuclear signaling… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B8PYG1
- Type
- protein
- Length
- 570 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x8Ef4B0e3a9c7484e6C8494e87e7D54b0584aBf9c
- Molecule
- NMDA receptor synaptonuclear signaling and neuronal migration factor
- UniProt
- B8PYG1
- Pockets
- 4 · best druggability 0.50
Structure
1 distinct chain · 20% helix, 7% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | NMDA receptor synaptonuclear signaling and neuronal migration factor | protein | 570 | 20% helix, 7% strand | B8PYG1 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 206 | 0.50 | 0.76 | 27 | empty |
| 2 | 68 | 0.32 | 0.75 | 15 | empty |
| 3 | 70 | 0.32 | 0.75 | 10 | empty |
| 4 | 72 | 0.32 | 0.75 | 16 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B8PYG1
- Elsewhere: UniProt B8PYG1 · AlphaFold DB B8PYG1
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