Research workbench
AlphaFold monomer V2.0 prediction for putative neutral sphingomyelinase (Q9VZS6)
Analyse AlphaFold monomer V2.0 prediction for putative neutral sphingomyelinase (Q9VZS6) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9VZS6
- Type
- protein
- Length
- 442 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x734B0A412b00947f49302B3B9D1B37eE38d37FB5
- Molecule
- Putative neutral sphingomyelinase
- UniProt
- Q9VZS6
- Pockets
- 6 · best druggability 0.60
Structure
1 distinct chain · 36% helix, 20% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Putative neutral sphingomyelinase | protein | 442 | 36% helix, 20% strand | Q9VZS6 |
Pockets
6 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 339 | 0.60 | 0.77 | 36 | empty |
| 2 | 109 | 0.42 | 0.77 | 20 | empty |
| 3 | 103 | 0.34 | 0.73 | 22 | empty |
| 4 | 62 | 0.31 | 0.75 | 15 | empty |
| 5 | 51 | 0.30 | 0.76 | 17 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9VZS6
- Elsewhere: UniProt Q9VZS6 · AlphaFold DB Q9VZS6
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