Research workbench
AlphaFold monomer V2.0 prediction for non-structural maintenance of chromosomes element 1 (Q07913)
Analyse AlphaFold monomer V2.0 prediction for non-structural maintenance of chromosomes… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q07913
- Type
- protein
- Length
- 336 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xEa58c7534E5701aA8370E0fAEb19b7e14653e69c
- Molecule
- Non-structural maintenance of chromosomes element 1
- UniProt
- Q07913
- Pockets
- 2 · best druggability 0.76
Structure
1 distinct chain · 48% helix, 13% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Non-structural maintenance of chromosomes element 1 | protein | 336 | 48% helix, 13% strand | Q07913 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1027 | 0.76 | 0.78 | 96 | empty |
| 2 | 82 | 0.41 | 0.79 | 18 | empty |
Compared structures
- 7QCD · CryoEM structure of the Smc5/6-holocomplex (composite structure) · an experimental structure of the same protein · chain A against D, TM-score 0.91
- 7YMD · Cryo-EM structure of Nse1/3/4 · an experimental structure of the same protein · chain A against B, TM-score 0.84
- 7YQH · Cryo-EM structure of 8-subunit Smc5/6 · an experimental structure of the same protein · chain A against F, TM-score 0.84
- 8HQS · Cryo-EM structure of 8-subunit Smc5/6 head region · an experimental structure of the same protein · chain A against F, TM-score 0.84
- 8WJN · Cryo-EM structure of 6-subunit Smc5/6 head region · an experimental structure of the same protein · chain A against F, TM-score 0.82
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q07913
- Elsewhere: UniProt Q07913 · AlphaFold DB Q07913
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