Research workbench
AlphaFold monomer V2.0 prediction for neurexin-1 (Q9DDD0)
Analyse AlphaFold monomer V2.0 prediction for neurexin-1 (Q9DDD0) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9DDD0
- Type
- protein
- Length
- 1,363 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x1356c5012d2a4B7147D097c2440ef76F9D0C0f34
- Molecule
- Neurexin-1
- UniProt
- Q9DDD0
- Pockets
- 9 · best druggability 0.76
Structure
1 distinct chain · 8% helix, 36% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Neurexin-1 | protein | 1363 | 8% helix, 36% strand | Q9DDD0 |
Pockets
9 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1167 | 0.76 | 0.78 | 84 | empty |
| 2 | 135 | 0.56 | 0.83 | 26 | empty |
| 3 | 62 | 0.53 | 0.87 | 17 | empty |
| 4 | 92 | 0.53 | 0.84 | 26 | empty |
| 5 | 219 | 0.48 | 0.74 | 28 | empty |
Modifications
Observed in the structure: 14 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9DDD0
- Elsewhere: UniProt Q9DDD0 · AlphaFold DB Q9DDD0
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