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AlphaFold monomer V2.0 prediction for nuclear receptor subfamily 0 group B member 1 (Q61066)

Analyse AlphaFold monomer V2.0 prediction for nuclear receptor subfamily 0 group B… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

Accession: Q61066
Type: protein
Length: 472 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0x429aA010A80A47FF4a2777bB34A2bba144d19df2
Molecule: Nuclear receptor subfamily 0 group B member 1
UniProt: Q61066
Pockets: 7 · best druggability 0.59

Structure

1 distinct chain · 39% helix, 4% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Nuclear receptor subfamily 0 group B member 1	protein	472	39% helix, 4% strand	Q61066

Pockets

7 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	193	0.59	0.81	30	empty
2	197	0.57	0.80	28	empty
3	270	0.56	0.77	23	empty
4	137	0.42	0.75	20	empty
5	157	0.41	0.73	20	empty

Modifications

Observed in the structure: 4 disulfide (disulfide).

Compared structures

3F5C · Structure of Dax-1:LRH-1 complex · an experimental structure of the same protein · chain A against B, TM-score 0.38
3F5C · Structure of dax-1:LRH-1 complex · an experimental structure of the same protein · chain A against B, TM-score 0.38

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q61066
Elsewhere: UniProt Q61066 · AlphaFold DB Q61066

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