Research workbench
AlphaFold monomer V2.0 prediction for na(+)-translocating NADH- quinone reductase subunit B (Q8DBJ5)
Analyse AlphaFold monomer V2.0 prediction for na(+)-translocating NADH- quinone… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q8DBJ5
- Type
- protein
- Length
- 414 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x091554B316044d26D7307E7F5d45AEFbD0138EB3
- Molecule
- Na(+)-translocating NADH-quinone reductase subunit B
- UniProt
- Q8DBJ5
- Pockets
- 6 · best druggability 0.72
Structure
1 distinct chain · 65% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Na(+)-translocating NADH-quinone reductase subunit B | protein | 414 | 65% helix, 0% strand | Q8DBJ5 |
Pockets
6 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 134 | 0.72 | 0.92 | 29 | empty |
| 2 | 143 | 0.69 | 0.89 | 27 | empty |
| 3 | 226 | 0.53 | 0.76 | 32 | empty |
| 4 | 100 | 0.42 | 0.77 | 16 | empty |
| 5 | 73 | 0.31 | 0.74 | 23 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8DBJ5
- Elsewhere: UniProt Q8DBJ5 · AlphaFold DB Q8DBJ5
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