Research workbench

AlphaFold monomer V2.0 prediction for NAD(P)H dehydrogenase (quinone) (Q9I509)

Analyse AlphaFold monomer V2.0 prediction for NAD(P)H dehydrogenase (quinone) (Q9I509) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

Accession: Q9I509
Type: protein
Length: 198 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0x6DAA77C4263E74E745cA9c4D8E291e57e8991Cf5
Molecule: NAD(P)H dehydrogenase (quinone)
UniProt: Q9I509
Pockets: 2 · best druggability 0.40

Structure

1 distinct chain · 37% helix, 20% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	NAD(P)H dehydrogenase (quinone)	protein	198	37% helix, 20% strand	Q9I509

Pockets

2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	65	0.40	0.80	15	empty
2	63	0.27	0.73	17	empty

Compared structures

1ZWL · Structure of WrbA from Pseudomonas aeruginosa in complex with FMN · an experimental structure of the same protein · chain A against A, TM-score 0.86
1ZWL · Structure of wrba from pseudomonas aeruginosa in complex with FMN · an experimental structure of the same protein · chain A against A, TM-score 0.86
1ZWK · Structure of WrbA from Pseudomonas aeruginosa · an experimental structure of the same protein · chain A against A, TM-score 0.84
1ZWK · Structure of wrba from pseudomonas aeruginosa · an experimental structure of the same protein · chain A against A, TM-score 0.84

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q9I509
Elsewhere: UniProt Q9I509 · AlphaFold DB Q9I509

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