Research workbench
AlphaFold monomer V2.0 prediction for NAD-capped RNA hydrolase NPY1 (P53164)
Analyse AlphaFold monomer V2.0 prediction for NAD-capped RNA hydrolase NPY1 (P53164) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P53164
- Type
- protein
- Length
- 384 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xd139976F01d9eAE08b8AF23De4Bf3f70936ACdB8
- Molecule
- NAD-capped RNA hydrolase NPY1
- UniProt
- P53164
- Pockets
- 4 · best druggability 0.70
Structure
1 distinct chain · 29% helix, 28% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | NAD-capped RNA hydrolase NPY1 | protein | 384 | 29% helix, 28% strand | P53164 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 365 | 0.70 | 0.82 | 42 | empty |
| 2 | 100 | 0.45 | 0.79 | 20 | empty |
| 3 | 52 | 0.30 | 0.76 | 16 | empty |
| 4 | 50 | 0.26 | 0.74 | 11 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P53164
- Elsewhere: UniProt P53164 · AlphaFold DB P53164
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