Research workbench
AlphaFold monomer V2.0 prediction for NAD-capped RNA hydrolase ndx-9 (Q19427)
Analyse AlphaFold monomer V2.0 prediction for NAD-capped RNA hydrolase ndx-9 (Q19427) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q19427
- Type
- protein
- Length
- 374 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xC416EAe88162fE5e5FCc9C720A60b7eb703e7AfD
- Molecule
- NAD-capped RNA hydrolase ndx-9
- UniProt
- Q19427
- Pockets
- 5 · best druggability 0.67
Structure
1 distinct chain · 33% helix, 26% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | NAD-capped RNA hydrolase ndx-9 | protein | 374 | 33% helix, 26% strand | Q19427 |
Pockets
5 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 420 | 0.67 | 0.79 | 35 | empty |
| 2 | 251 | 0.51 | 0.75 | 38 | empty |
| 3 | 114 | 0.40 | 0.75 | 19 | empty |
| 4 | 87 | 0.35 | 0.75 | 20 | empty |
| 5 | 51 | 0.25 | 0.73 | 12 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q19427
- Elsewhere: UniProt Q19427 · AlphaFold DB Q19427
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