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AlphaFold monomer V2.0 prediction for tryptophan dimethylallyltransferase npta (C8VEJ5)
Analyse AlphaFold monomer V2.0 prediction for tryptophan dimethylallyltransferase npta… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- C8VEJ5
- Type
- protein
- Length
- 434 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xEa0B57aD486d6137BB24F190997CF1329746695b
- Molecule
- Tryptophan dimethylallyltransferase npta
- UniProt
- C8VEJ5
- Pockets
- 6 · best druggability 0.81
Structure
1 distinct chain · 43% helix, 19% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Tryptophan dimethylallyltransferase npta | protein | 434 | 43% helix, 19% strand | C8VEJ5 |
Pockets
6 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 414 | 0.81 | 0.89 | 52 | empty |
| 2 | 325 | 0.57 | 0.76 | 43 | empty |
| 3 | 119 | 0.47 | 0.78 | 21 | empty |
| 4 | 97 | 0.38 | 0.76 | 19 | empty |
| 5 | 68 | 0.36 | 0.77 | 14 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt C8VEJ5
- Elsewhere: UniProt C8VEJ5 · AlphaFold DB C8VEJ5
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