Research workbench
AlphaFold monomer V2.0 prediction for nephrocystin-3 (A0JM23)
Analyse AlphaFold monomer V2.0 prediction for nephrocystin-3 (A0JM23) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A0JM23
- Type
- protein
- Length
- 1,311 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xb4D2d9c96b0D792d0b77e7147D724cc1F801ae58
- Molecule
- Nephrocystin-3
- UniProt
- A0JM23
- Pockets
- 14 · best druggability 0.87
Structure
1 distinct chain · 62% helix, 5% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Nephrocystin-3 | protein | 1311 | 62% helix, 5% strand | A0JM23 |
Pockets
14 pockets found on a 1 Å grid, 6 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1102 | 0.87 | 0.88 | 108 | empty |
| 2 | 1182 | 0.83 | 0.84 | 117 | empty |
| 3 | 616 | 0.66 | 0.76 | 54 | empty |
| 4 | 145 | 0.58 | 0.83 | 30 | empty |
| 5 | 184 | 0.54 | 0.79 | 24 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0JM23
- Elsewhere: UniProt A0JM23 · AlphaFold DB A0JM23
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