Research workbench
AlphaFold monomer V2.0 prediction for nephrocystin-3 (Q6AZT7)
Analyse AlphaFold monomer V2.0 prediction for nephrocystin-3 (Q6AZT7) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q6AZT7
- Type
- protein
- Length
- 1,300 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x23FaC215931a13Fd91a20E6247CDBf3A4476C85f
- Molecule
- Nephrocystin-3
- UniProt
- Q6AZT7
- Pockets
- 17 · best druggability 0.82
Structure
1 distinct chain · 60% helix, 5% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Nephrocystin-3 | protein | 1300 | 60% helix, 5% strand | Q6AZT7 |
Pockets
17 pockets found on a 1 Å grid, 10 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1035 | 0.82 | 0.83 | 93 | empty |
| 2 | 418 | 0.72 | 0.83 | 46 | empty |
| 3 | 69 | 0.72 | 0.97 | 26 | empty |
| 4 | 350 | 0.66 | 0.81 | 41 | empty |
| 5 | 138 | 0.65 | 0.87 | 25 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q6AZT7
- Elsewhere: UniProt Q6AZT7 · AlphaFold DB Q6AZT7
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