Research workbench

AlphaFold monomer V2.0 prediction for NADH dehydrogenase (Q60049)

Analyse AlphaFold monomer V2.0 prediction for NADH dehydrogenase (Q60049) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

Accession: Q60049
Type: protein
Length: 205 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0xBF0D2e107Ce1EcD2C4369B042274201DB719AaAF
Molecule: NADH dehydrogenase
UniProt: Q60049
Pockets: 1 · best druggability 0.31

Structure

1 distinct chain · 48% helix, 15% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	NADH dehydrogenase	protein	205	48% helix, 15% strand	Q60049

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	62	0.31	0.75	17	empty

Compared structures

1NOX · NADH oxidase from thermus thermophilus · an experimental structure of the same protein · chain A against A, TM-score 0.97
1NOX · NADH oxidase from thermus thermophilus · an experimental structure of the same protein · chain A against A, TM-score 0.97

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q60049
Elsewhere: UniProt Q60049 · AlphaFold DB Q60049

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