Research workbench
AlphaFold monomer V2.0 prediction for 8-demethylnovobiocic acid C(8)-methyltransferase (Q9L9F3)
Analyse AlphaFold monomer V2.0 prediction for 8-demethylnovobiocic acid… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9L9F3
- Type
- protein
- Length
- 230 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x347eB4f8d19409C2e56B7bb14c5737cE89b32fec
- Molecule
- 8-demethylnovobiocic acid C(8)-methyltransferase
- UniProt
- Q9L9F3
- Pockets
- 2 · best druggability 0.84
Structure
1 distinct chain · 47% helix, 22% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | 8-demethylnovobiocic acid C(8)-methyltransferase | protein | 230 | 47% helix, 22% strand | Q9L9F3 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 247 | 0.84 | 0.96 | 41 | empty |
| 2 | 63 | 0.40 | 0.80 | 13 | empty |
Compared structures
- 5MGZ · Streptomyces spheroides novo (8-demethylnovbiocic acid methyltransferase) with sah · an experimental structure of the same protein · chain A against A, TM-score 0.99
- 5MGZ · Streptomyces Spheroides NovO (8-demethylnovbiocic acid methyltransferase) with SAH · an experimental structure of the same protein · chain A against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9L9F3
- Elsewhere: UniProt Q9L9F3 · AlphaFold DB Q9L9F3
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