Research workbench
AlphaFold monomer V2.0 prediction for palmitoleoyl-protein carboxylesterase notum (Q9VUX3)
Analyse AlphaFold monomer V2.0 prediction for palmitoleoyl-protein carboxylesterase… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9VUX3
- Type
- protein
- Length
- 671 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x75C12fEa2C5bf98C367f80F42A91Bb058381Aa0C
- Molecule
- Palmitoleoyl-protein carboxylesterase notum
- UniProt
- Q9VUX3
- Pockets
- 8 · best druggability 0.63
Structure
1 distinct chain · 36% helix, 10% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Palmitoleoyl-protein carboxylesterase notum | protein | 671 | 36% helix, 10% strand | Q9VUX3 |
Pockets
8 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 276 | 0.63 | 0.81 | 37 | empty |
| 2 | 210 | 0.62 | 0.82 | 31 | empty |
| 3 | 150 | 0.47 | 0.77 | 26 | empty |
| 4 | 81 | 0.42 | 0.79 | 16 | empty |
| 5 | 87 | 0.37 | 0.76 | 18 | empty |
Modifications
Observed in the structure: 6 disulfide (disulfide).
Compared structures
- 4UZK · Structure of the wnt deacylase notum from drosophila - crystal form II - 1.9A · an experimental structure of the same protein · chain A against B, TM-score 0.52
- 4UZK · Structure of the wnt deacylase notum from drosophila - crystal form II - 1.9A · an experimental structure of the same protein · chain A against B, TM-score 0.52
- 4UZJ · Structure of the wnt deacylase notum from drosophila - crystal form I - 2.4A · an experimental structure of the same protein · chain A against A, TM-score 0.51
- 4UZJ · Structure of the wnt deacylase notum from drosophila - crystal form I - 2.4A · an experimental structure of the same protein · chain A against A, TM-score 0.51
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9VUX3
- Elsewhere: UniProt Q9VUX3 · AlphaFold DB Q9VUX3
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