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AlphaFold monomer V2.0 prediction for deoxybrevianamide E synthase notf (E0Y3X1)

Analyse AlphaFold monomer V2.0 prediction for deoxybrevianamide E synthase notf (E0Y3X1) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

Accession: E0Y3X1
Type: protein
Length: 452 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0x3F68E74Da58A02eCfd34cED79740EF24407440ed
Molecule: Deoxybrevianamide E synthase notf
UniProt: E0Y3X1
Pockets: 3 · best druggability 0.82

Structure

1 distinct chain · 36% helix, 17% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Deoxybrevianamide E synthase notf	protein	452	36% helix, 17% strand	E0Y3X1

Pockets

3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	523	0.82	0.88	72	empty
2	51	0.40	0.82	19	empty
3	55	0.31	0.76	14	empty

Compared structures

6VY9 · Crystal structure of NotF prenyltransferase · an experimental structure of the same protein · chain A against F, TM-score 0.84
6VY9 · Crystal structure of notf prenyltransferase · an experimental structure of the same protein · chain A against A, TM-score 0.84
6VYA · Crystal structure of NotF in complex with brevianamide F and DMSPP · an experimental structure of the same protein · chain A against M, TM-score 0.84

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt E0Y3X1
Elsewhere: UniProt E0Y3X1 · AlphaFold DB E0Y3X1

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