Research workbench
AlphaFold monomer V2.0 prediction for nucleolar GTP-binding protein 1 (G0S8F1)
Analyse AlphaFold monomer V2.0 prediction for nucleolar GTP-binding protein 1 (G0S8F1) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- G0S8F1
- Type
- protein
- Length
- 661 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xc0F878C3f3E2a1874e2A6daC80d429e553DdB0D5
- Molecule
- Nucleolar GTP-binding protein 1
- UniProt
- G0S8F1
- Pockets
- 1 · best druggability 0.56
Structure
1 distinct chain · 50% helix, 7% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Nucleolar GTP-binding protein 1 | protein | 661 | 50% helix, 7% strand | G0S8F1 |
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 98 | 0.56 | 0.86 | 27 | empty |
Compared structures
- 8PV5 · Chaetomium thermophilum pre-60S State 8 - pre-5S rotation without Foot - composite… · an experimental structure of the same protein · chain A against CH, TM-score 0.76
- 8PV2 · Chaetomium thermophilum pre-60S State 10 - pre-5S rotation with Ytm1-Erb1 · an experimental structure of the same protein · chain A against CH, TM-score 0.76
- 8PVL · Chaetomium thermophilum pre-60S State 7 - pre-5S rotation lacking Utp30/ITS2 - composite… · an experimental structure of the same protein · chain A against CH, TM-score 0.76
- 8PV4 · Chaetomium thermophilum pre-60S State 2 - pre-5S rotation with Rix1 complex - composite… · an experimental structure of the same protein · chain A against CH, TM-score 0.76
- 8PV1 · Chaetomium thermophilum pre-60S State 6 - pre-5S rotation - L1 intermediate - composite… · an experimental structure of the same protein · chain A against CH, TM-score 0.76
- 8PV7 · Chaetomium thermophilum pre-60S State 1 - pre-5S rotation (Arx1/Nog2 state) - Composite… · an experimental structure of the same protein · chain A against CH, TM-score 0.76
- 8PVK · Chaetomium thermophilum pre-60S State 5 - pre-5S rotation - L1 inward - composite… · an experimental structure of the same protein · chain A against CH, TM-score 0.76
- 8PV8 · Chaetomium thermophilum pre-60S State 4 - post-5S rotation with Rix1 complex without Foot… · an experimental structure of the same protein · chain A against CH, TM-score 0.76
- 8PV3 · Chaetomium thermophilum pre-60S State 9 - pre-5S rotation - immature H68/H69 - composite… · an experimental structure of the same protein · chain A against CH, TM-score 0.76
- 8PV6 · Chaetomium thermophilum pre-60S State 3 - post-5S rotation with Rix1 complex with Foot… · an experimental structure of the same protein · chain A against CH, TM-score 0.75
- 8IA0 · Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Puf6 · an experimental structure of the same protein · chain A against CH, TM-score 0.73
- 8I9Y · Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - Ytm1-2 · an experimental structure of the same protein · chain A against CH, TM-score 0.73
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt G0S8F1
- Elsewhere: UniProt G0S8F1 · AlphaFold DB G0S8F1
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