Research workbench
AlphaFold monomer V2.0 prediction for nodulation protein D 2 (P55700)
Analyse AlphaFold monomer V2.0 prediction for nodulation protein D 2 (P55700) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P55700
- Type
- protein
- Length
- 312 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x40B9C9d5F084D34d026E9d5Dd10501AcdF6d6152
- Molecule
- Nodulation protein D 2
- UniProt
- P55700
- Pockets
- 3 · best druggability 0.64
Structure
1 distinct chain · 42% helix, 23% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Nodulation protein D 2 | protein | 312 | 42% helix, 23% strand | P55700 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 136 | 0.64 | 0.86 | 20 | empty |
| 2 | 156 | 0.43 | 0.75 | 20 | empty |
| 3 | 68 | 0.40 | 0.80 | 13 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P55700
- Elsewhere: UniProt P55700 · AlphaFold DB P55700
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.