Research workbench
AlphaFold monomer V2.0 prediction for nodulation protein D 1 (P23718)
Analyse AlphaFold monomer V2.0 prediction for nodulation protein D 1 (P23718) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P23718
- Type
- protein
- Length
- 314 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xbff27Dc0a932A6E0d9Fe883AAbD1BF27bB95A69F
- Molecule
- Nodulation protein D 1
- UniProt
- P23718
- Pockets
- 3 · best druggability 0.45
Structure
1 distinct chain · 45% helix, 22% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Nodulation protein D 1 | protein | 314 | 45% helix, 22% strand | P23718 |
Pockets
3 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 161 | 0.45 | 0.76 | 29 | empty |
| 2 | 68 | 0.31 | 0.74 | 12 | empty |
| 3 | 53 | 0.29 | 0.75 | 13 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P23718
- Elsewhere: UniProt P23718 · AlphaFold DB P23718
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