Research workbench
AlphaFold monomer V2.0 prediction for nodulation protein D 1 (P12232)
Analyse AlphaFold monomer V2.0 prediction for nodulation protein D 1 (P12232) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P12232
- Type
- protein
- Length
- 321 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xED142F5d95AB46c4f0238E3420b71F0f9f82471f
- Molecule
- Nodulation protein D 1
- UniProt
- P12232
- Pockets
- 4 · best druggability 0.33
Structure
1 distinct chain · 46% helix, 21% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Nodulation protein D 1 | protein | 321 | 46% helix, 21% strand | P12232 |
Pockets
4 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 114 | 0.33 | 0.72 | 19 | empty |
| 2 | 73 | 0.33 | 0.75 | 12 | empty |
| 3 | 61 | 0.32 | 0.76 | 19 | empty |
| 4 | 54 | 0.26 | 0.73 | 13 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P12232
- Elsewhere: UniProt P12232 · AlphaFold DB P12232
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