Research workbench
AlphaFold monomer V2.0 prediction for prenyl transferase nodc (A0A2I6PJ13)
Analyse AlphaFold monomer V2.0 prediction for prenyl transferase nodc (A0A2I6PJ13) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A0A2I6PJ13
- Type
- protein
- Length
- 326 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x4d07E6a23DeB6B95bd9b90EcB67368b7e8D3B77e
- Molecule
- Prenyl transferase nodc
- Pockets
- 3 · best druggability 0.78
Structure
1 distinct chain · 74% helix, 1% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Prenyl transferase nodc | protein | 326 | 74% helix, 1% strand | — |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 414 | 0.78 | 0.87 | 47 | empty |
| 2 | 112 | 0.37 | 0.74 | 17 | empty |
| 3 | 71 | 0.30 | 0.74 | 16 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
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