Research workbench
AlphaFold monomer V2.0 prediction for nodal (P43021)
Analyse AlphaFold monomer V2.0 prediction for nodal (P43021) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P43021
- Type
- protein
- Length
- 354 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x5881B09f2D8e743400698633641fc1cD2Ed2BE6F
- Molecule
- Nodal
- UniProt
- P43021
- Pockets
- 6 · best druggability 0.60
Structure
1 distinct chain · 18% helix, 31% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Nodal | protein | 354 | 18% helix, 31% strand | P43021 |
Pockets
6 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 403 | 0.60 | 0.76 | 39 | empty |
| 2 | 50 | 0.46 | 0.85 | 15 | empty |
| 3 | 123 | 0.45 | 0.77 | 17 | empty |
| 4 | 66 | 0.42 | 0.81 | 14 | empty |
| 5 | 80 | 0.29 | 0.72 | 15 | empty |
Modifications
Observed in the structure: 4 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P43021
- Elsewhere: UniProt P43021 · AlphaFold DB P43021
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