Research workbench
AlphaFold monomer V2.0 prediction for glutamate receptor ionotropic, NMDA 2B (Q01097)
Analyse AlphaFold monomer V2.0 prediction for glutamate receptor ionotropic, NMDA 2B… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q01097
- Type
- protein
- Length
- 1,482 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xe9f3e03f1c0D674c8ca581614bB1f27977239e4c
- Molecule
- Glutamate receptor ionotropic, NMDA 2B
- UniProt
- Q01097
- Pockets
- 14 · best druggability 0.73
Structure
1 distinct chain · 25% helix, 10% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Glutamate receptor ionotropic, NMDA 2B | protein | 1482 | 25% helix, 10% strand | Q01097 |
Pockets
14 pockets found on a 1 Å grid, 6 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 699 | 0.73 | 0.79 | 45 | empty |
| 2 | 174 | 0.67 | 0.86 | 31 | empty |
| 3 | 118 | 0.65 | 0.89 | 26 | empty |
| 4 | 352 | 0.60 | 0.77 | 45 | empty |
| 5 | 141 | 0.52 | 0.81 | 27 | empty |
Modifications
Observed in the structure: 4 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q01097
- Elsewhere: UniProt Q01097 · AlphaFold DB Q01097
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