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AlphaFold monomer V2.0 prediction for glutamate [NMDA] receptor subunit 1 (B4JHV0)
Analyse AlphaFold monomer V2.0 prediction for glutamate [NMDA] receptor subunit 1… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B4JHV0
- Type
- protein
- Length
- 982 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x3298b100681D3A2372Bba3b2f282750dD71629B9
- Molecule
- Glutamate [NMDA] receptor subunit 1
- UniProt
- B4JHV0
- Pockets
- 8 · best druggability 0.59
Structure
1 distinct chain · 41% helix, 17% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Glutamate [NMDA] receptor subunit 1 | protein | 982 | 41% helix, 17% strand | B4JHV0 |
Pockets
8 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 236 | 0.59 | 0.80 | 32 | empty |
| 2 | 192 | 0.46 | 0.75 | 28 | empty |
| 3 | 92 | 0.46 | 0.80 | 21 | empty |
| 4 | 182 | 0.45 | 0.75 | 31 | empty |
| 5 | 122 | 0.44 | 0.77 | 19 | empty |
Modifications
Observed in the structure: 4 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B4JHV0
- Elsewhere: UniProt B4JHV0 · AlphaFold DB B4JHV0
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