Research workbench
AlphaFold monomer V2.0 prediction for nonsense-mediated decay protein 4 (Q6BJE2)
Analyse AlphaFold monomer V2.0 prediction for nonsense-mediated decay protein 4 (Q6BJE2) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q6BJE2
- Type
- protein
- Length
- 416 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x97EfFf2d74994e28D3b69b1503Bd9c292B2Df480
- Molecule
- Nonsense-mediated decay protein 4
- UniProt
- Q6BJE2
- Pockets
- 4 · best druggability 0.63
Structure
1 distinct chain · 27% helix, 10% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Nonsense-mediated decay protein 4 | protein | 416 | 27% helix, 10% strand | Q6BJE2 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 467 | 0.63 | 0.76 | 63 | empty |
| 2 | 138 | 0.44 | 0.76 | 22 | empty |
| 3 | 65 | 0.33 | 0.76 | 14 | empty |
| 4 | 77 | 0.32 | 0.74 | 17 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q6BJE2
- Elsewhere: UniProt Q6BJE2 · AlphaFold DB Q6BJE2
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