Research workbench
AlphaFold monomer V2.0 prediction for nonsense-mediated decay protein 4 (Q5AM50)
Analyse AlphaFold monomer V2.0 prediction for nonsense-mediated decay protein 4 (Q5AM50) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q5AM50
- Type
- protein
- Length
- 398 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x9B130d619fCFc21d0D08E5Ce38Cf42A5fbe230CB
- Molecule
- Nonsense-mediated decay protein 4
- UniProt
- Q5AM50
- Pockets
- 4 · best druggability 0.53
Structure
1 distinct chain · 32% helix, 12% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Nonsense-mediated decay protein 4 | protein | 398 | 32% helix, 12% strand | Q5AM50 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 162 | 0.53 | 0.79 | 22 | empty |
| 2 | 139 | 0.40 | 0.74 | 27 | empty |
| 3 | 127 | 0.37 | 0.73 | 19 | empty |
| 4 | 56 | 0.29 | 0.75 | 9 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5AM50
- Elsewhere: UniProt Q5AM50 · AlphaFold DB Q5AM50
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