Research workbench
AlphaFold monomer V2.0 prediction for neuromedin-B receptor (P28336)
Analyse AlphaFold monomer V2.0 prediction for neuromedin-B receptor (P28336) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P28336
- Type
- protein
- Length
- 390 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x45d8D4ee8f2360A9C240C13D999Cf56Beaf8eE7C
- Molecule
- Neuromedin-B receptor
- UniProt
- P28336
- Pockets
- 4 · best druggability 0.79
Structure
1 distinct chain · 63% helix, 3% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Neuromedin-B receptor | protein | 390 | 63% helix, 3% strand | P28336 |
Pockets
4 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 977 | 0.79 | 0.81 | 59 | empty |
| 2 | 235 | 0.61 | 0.80 | 37 | empty |
| 3 | 72 | 0.33 | 0.74 | 14 | empty |
| 4 | 50 | 0.30 | 0.76 | 11 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Compared structures
- 8H0P · Structure of the NMB30-NMBR and Gq complex · an experimental structure of the same protein · chain A against R, TM-score 0.66
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P28336
- Elsewhere: UniProt P28336 · AlphaFold DB P28336
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