Research workbench
AlphaFold monomer V2.0 prediction for lipoprotein nlpe (P40710)
Analyse AlphaFold monomer V2.0 prediction for lipoprotein nlpe (P40710) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P40710
- Type
- protein
- Length
- 236 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x54FBC17A5C73fF6f44d925D726c013269Fd7F733
- Molecule
- Lipoprotein nlpe
- UniProt
- P40710
- Pockets
- 1 · best druggability 0.42
Structure
1 distinct chain · 6% helix, 41% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Lipoprotein nlpe | protein | 236 | 6% helix, 41% strand | P40710 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 161 | 0.42 | 0.74 | 23 | empty |
Modifications
Observed in the structure: 2 disulfide (disulfide).
Compared structures
- 2Z4H · Crystal structure of the Cpx pathway activator NlpE from Escherichia coli · an experimental structure of the same protein · chain A against B, TM-score 0.43
- 2Z4H · Crystal structure of the cpx pathway activator nlpe from escherichia COLI · an experimental structure of the same protein · chain A against B, TM-score 0.43
- 2Z4I · Crystal structure of the Cpx pathway activator NlpE from Escherichia coli · an experimental structure of the same protein · chain A against B, TM-score 0.43
- 2Z4I · Crystal structure of the cpx pathway activator nlpe from escherichia COLI · an experimental structure of the same protein · chain A against B, TM-score 0.43
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P40710
- Elsewhere: UniProt P40710 · AlphaFold DB P40710
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