Research workbench
AlphaFold monomer V2.0 prediction for neuroligin-3 (Q9NZ94)
Analyse AlphaFold monomer V2.0 prediction for neuroligin-3 (Q9NZ94) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9NZ94
- Type
- protein
- Length
- 848 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x46EfCa788d03A3e879DAcDb96552AB8Bbc7e20b3
- Molecule
- Neuroligin-3
- UniProt
- Q9NZ94
- Pockets
- 6 · best druggability 0.72
Structure
1 distinct chain · 33% helix, 9% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Neuroligin-3 | protein | 848 | 33% helix, 9% strand | Q9NZ94 |
Pockets
6 pockets found on a 1 Å grid, 5 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 589 | 0.72 | 0.80 | 57 | empty |
| 2 | 50 | 0.69 | 0.97 | 18 | empty |
| 3 | 434 | 0.67 | 0.79 | 48 | empty |
| 4 | 189 | 0.64 | 0.84 | 38 | empty |
| 5 | 337 | 0.61 | 0.78 | 25 | empty |
Modifications
Observed in the structure: 4 disulfide (disulfide).
Compared structures
- 8GS3 · Cryo-EM structure of human Neuroligin 3 · an experimental structure of the same protein · chain A against A, TM-score 0.63
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9NZ94
- Elsewhere: UniProt Q9NZ94 · AlphaFold DB Q9NZ94
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