Research workbench
AlphaFold monomer V2.0 prediction for nischarin (Q9Y2I1)
Analyse AlphaFold monomer V2.0 prediction for nischarin (Q9Y2I1) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9Y2I1
- Type
- protein
- Length
- 1,504 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x058c4C0f329bb1F8Be9be0DFCbC9073d1000Ba26
- Molecule
- Nischarin
- UniProt
- Q9Y2I1
- Pockets
- 18 · best druggability 0.75
Structure
1 distinct chain · 28% helix, 20% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Nischarin | protein | 1504 | 28% helix, 20% strand | Q9Y2I1 |
Pockets
18 pockets found on a 1 Å grid, 10 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1014 | 0.75 | 0.78 | 90 | empty |
| 2 | 868 | 0.71 | 0.76 | 77 | empty |
| 3 | 449 | 0.69 | 0.80 | 50 | empty |
| 4 | 632 | 0.69 | 0.77 | 57 | empty |
| 5 | 177 | 0.66 | 0.86 | 27 | empty |
Compared structures
- 8ESF · Crystal structure of human Nischarin PX and LRR domains with engineered mutations · an experimental structure of the same protein · chain A against A, TM-score 0.28
- 3P0C · Nischarin PX-domain · an experimental structure of the same protein · chain A against B, TM-score 0.07
- 3P0C · Nischarin px-domain · an experimental structure of the same protein · chain A against B, TM-score 0.07
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9Y2I1
- Elsewhere: UniProt Q9Y2I1 · AlphaFold DB Q9Y2I1
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.