Research workbench
AlphaFold monomer V2.0 prediction for nickel transport protein nikq (D5AQY7)
Analyse AlphaFold monomer V2.0 prediction for nickel transport protein nikq (D5AQY7) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- D5AQY7
- Type
- protein
- Length
- 284 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x196C286b0017BF4535E094dDd7e0ACAC05852e70
- Molecule
- Nickel transport protein nikq
- UniProt
- D5AQY7
- Pockets
- 5 · best druggability 0.62
Structure
1 distinct chain · 74% helix, 2% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Nickel transport protein nikq | protein | 284 | 74% helix, 2% strand | D5AQY7 |
Pockets
5 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 138 | 0.62 | 0.85 | 24 | empty |
| 2 | 135 | 0.41 | 0.74 | 20 | empty |
| 3 | 101 | 0.35 | 0.73 | 30 | empty |
| 4 | 64 | 0.30 | 0.75 | 15 | empty |
| 5 | 60 | 0.28 | 0.73 | 13 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt D5AQY7
- Elsewhere: UniProt D5AQY7 · AlphaFold DB D5AQY7
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