Research workbench
AlphaFold monomer V2.0 prediction for nickel import system permease protein nikb (Q5HG38)
Analyse AlphaFold monomer V2.0 prediction for nickel import system permease protein… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q5HG38
- Type
- protein
- Length
- 328 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x653cAe0D717b88665F9Ab264F74A25a820EeD0cb
- Molecule
- Nickel import system permease protein nikb
- UniProt
- Q5HG38
- Pockets
- 5 · best druggability 0.65
Structure
1 distinct chain · 76% helix, 1% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Nickel import system permease protein nikb | protein | 328 | 76% helix, 1% strand | Q5HG38 |
Pockets
5 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 253 | 0.65 | 0.82 | 26 | empty |
| 2 | 241 | 0.54 | 0.76 | 18 | empty |
| 3 | 114 | 0.38 | 0.74 | 20 | empty |
| 4 | 58 | 0.32 | 0.75 | 15 | empty |
| 5 | 50 | 0.30 | 0.76 | 15 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5HG38
- Elsewhere: UniProt Q5HG38 · AlphaFold DB Q5HG38
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