Research workbench
AlphaFold monomer V2.0 prediction for porin-like protein nicp (Q88FY7)
Analyse AlphaFold monomer V2.0 prediction for porin-like protein nicp (Q88FY7) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q88FY7
- Type
- protein
- Length
- 430 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x676cea925913029B25bFd75c68A60e44291ADf58
- Molecule
- Porin-like protein nicp
- UniProt
- Q88FY7
- Pockets
- 3 · best druggability 0.73
Structure
1 distinct chain · 1% helix, 56% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Porin-like protein nicp | protein | 430 | 1% helix, 56% strand | Q88FY7 |
Pockets
3 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1031 | 0.73 | 0.77 | 95 | empty |
| 2 | 271 | 0.52 | 0.75 | 46 | empty |
| 3 | 55 | 0.40 | 0.82 | 17 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q88FY7
- Elsewhere: UniProt Q88FY7 · AlphaFold DB Q88FY7
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