Research workbench
AlphaFold monomer V2.0 prediction for DNA nickase (Q8YS92)
Analyse AlphaFold monomer V2.0 prediction for DNA nickase (Q8YS92) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q8YS92
- Type
- protein
- Length
- 351 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x5e58272ea25a05e06901A2eAe9f63939b344e0c6
- Molecule
- DNA nickase
- UniProt
- Q8YS92
- Pockets
- 5 · best druggability 0.67
Structure
1 distinct chain · 84% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA nickase | protein | 351 | 84% helix, 0% strand | Q8YS92 |
Pockets
5 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 455 | 0.67 | 0.79 | 50 | empty |
| 2 | 282 | 0.63 | 0.81 | 23 | empty |
| 3 | 61 | 0.48 | 0.85 | 16 | empty |
| 4 | 72 | 0.32 | 0.74 | 15 | empty |
| 5 | 58 | 0.29 | 0.75 | 16 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8YS92
- Elsewhere: UniProt Q8YS92 · AlphaFold DB Q8YS92
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.