Research workbench
AlphaFold monomer V2.0 prediction for cobalt-containing nitrile hydratase subunit beta (Q7SID3)
Analyse AlphaFold monomer V2.0 prediction for cobalt-containing nitrile hydratase… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q7SID3
- Type
- protein
- Length
- 233 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xf4ED13986579E8e227b3ED6c02276c648754EC27
- Molecule
- Cobalt-containing nitrile hydratase subunit beta
- UniProt
- Q7SID3
- Pockets
- 3 · best druggability 0.54
Structure
1 distinct chain · 38% helix, 15% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Cobalt-containing nitrile hydratase subunit beta | protein | 233 | 38% helix, 15% strand | Q7SID3 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 349 | 0.54 | 0.73 | 26 | empty |
| 2 | 157 | 0.42 | 0.74 | 29 | empty |
| 3 | 86 | 0.36 | 0.76 | 21 | empty |
Compared structures
- 4OB3 · Crystal Structure of Nitrile Hydratase from Pseudonocardia thermophila : A Reference… · an experimental structure of the same protein · chain A against B, TM-score 0.97
- 4OB3 · Crystal structure of nitrile hydratase from pseudonocardia thermophila : a reference… · an experimental structure of the same protein · chain A against B, TM-score 0.97
- 4OB1 · Crystal Structure of Nitrile Hydratase from Pseudonocardia thermophila bound to… · an experimental structure of the same protein · chain A against B, TM-score 0.97
- 4OB1 · Crystal structure of nitrile hydratase from pseudonocardia thermophila bound to… · an experimental structure of the same protein · chain A against B, TM-score 0.97
- 4OB2 · Crystal structure of nitrile hydratase from pseudonocardia thermophila bound to… · an experimental structure of the same protein · chain A against B, TM-score 0.96
- 4OB2 · Crystal Structure of Nitrile Hydratase from Pseudonocardia thermophila bound to… · an experimental structure of the same protein · chain A against B, TM-score 0.96
- 4OB0 · Crystal Structure of Nitrile Hydratase from Pseudonocardia thermophila bound to Phenyl… · an experimental structure of the same protein · chain A against B, TM-score 0.96
- 4OB0 · Crystal structure of nitrile hydratase from pseudonocardia thermophila bound to phenyl… · an experimental structure of the same protein · chain A against B, TM-score 0.96
- 7SJZ · Crystal structure of aS162A mutant of Co-type nitrile hydratase from Pseudonocardia… · an experimental structure of the same protein · chain A against B, TM-score 0.96
- 7SJZ · Crystal structure of AS162A mutant of co-type nitrile hydratase from pseudonocardia… · an experimental structure of the same protein · chain A against B, TM-score 0.96
- 9D5Y · Nitrile hydratase S112T mutant · an experimental structure of the same protein · chain A against B, TM-score 0.96
- 9D5V · Nitrile hydratase S112D mutant · an experimental structure of the same protein · chain A against B, TM-score 0.96
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q7SID3
- Elsewhere: UniProt Q7SID3 · AlphaFold DB Q7SID3
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