Research workbench
AlphaFold monomer V2.0 prediction for nuclear transcription factor Y subunit C-4 (Q9FMV5)
Analyse AlphaFold monomer V2.0 prediction for nuclear transcription factor Y subunit… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9FMV5
- Type
- protein
- Length
- 250 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xC746AF6f646b588a47acE344208619CfEF12dD4b
- Molecule
- Nuclear transcription factor Y subunit C-4
- UniProt
- Q9FMV5
- Pockets
- 2 · best druggability 0.41
Structure
1 distinct chain · 35% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Nuclear transcription factor Y subunit C-4 | protein | 250 | 35% helix, 0% strand | Q9FMV5 |
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 87 | 0.41 | 0.78 | 14 | empty |
| 2 | 92 | 0.40 | 0.77 | 15 | empty |
Compared structures
- 7CVO · Crystal structure of arabidopsis co cct domain in complex with nf- YB3/YC4 and ft CORE2… · an experimental structure of the same protein · chain A against A, TM-score 0.31
- 7CVO · crystal structure of Arabidopsis CO CCT domain in complex with NF-YB3/YC4 and FT CORE2 DNA · an experimental structure of the same protein · chain A against A, TM-score 0.31
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9FMV5
- Elsewhere: UniProt Q9FMV5 · AlphaFold DB Q9FMV5
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