Research workbench
AlphaFold monomer V2.0 prediction for transcriptional repressor nf-X1 homolog (Q54BK0)
Analyse AlphaFold monomer V2.0 prediction for transcriptional repressor nf-X1 homolog… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q54BK0
- Type
- protein
- Length
- 1,506 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x3298b100681D3A2372Bba3b2f282750dD71629B9
- Molecule
- Transcriptional repressor nf-X1 homolog
- UniProt
- Q54BK0
- Pockets
- 11 · best druggability 0.55
Structure
1 distinct chain · 9% helix, 11% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Transcriptional repressor nf-X1 homolog | protein | 1506 | 9% helix, 11% strand | Q54BK0 |
Pockets
11 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 335 | 0.55 | 0.75 | 50 | empty |
| 2 | 174 | 0.51 | 0.78 | 31 | empty |
| 3 | 142 | 0.51 | 0.80 | 21 | empty |
| 4 | 93 | 0.51 | 0.82 | 19 | empty |
| 5 | 74 | 0.32 | 0.74 | 18 | empty |
Modifications
Observed in the structure: 9 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q54BK0
- Elsewhere: UniProt Q54BK0 · AlphaFold DB Q54BK0
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