Research workbench
AlphaFold monomer V2.0 prediction for ribosomal RNA small subunit methyltransferase NEP1 (B1YD95)
Analyse AlphaFold monomer V2.0 prediction for ribosomal RNA small subunit… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B1YD95
- Type
- protein
- Length
- 221 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xe6978154f003B8CE0AC2dEd3c6fdD559315c6935
- Molecule
- Ribosomal RNA small subunit methyltransferase NEP1
- UniProt
- B1YD95
- Pockets
- 1 · best druggability 0.63
Structure
1 distinct chain · 42% helix, 20% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ribosomal RNA small subunit methyltransferase NEP1 | protein | 221 | 42% helix, 20% strand | B1YD95 |
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 184 | 0.63 | 0.84 | 27 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B1YD95
- Elsewhere: UniProt B1YD95 · AlphaFold DB B1YD95
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