Research workbench
AlphaFold monomer V2.0 prediction for protein NEDD1 (P33215)
Analyse AlphaFold monomer V2.0 prediction for protein NEDD1 (P33215) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P33215
- Type
- protein
- Length
- 660 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x1ED4a68B4011314730adE976b56Ad4cA21b54dcD
- Molecule
- Protein NEDD1
- UniProt
- P33215
- Pockets
- 5 · best druggability 0.78
Structure
1 distinct chain · 15% helix, 24% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Protein NEDD1 | protein | 660 | 15% helix, 24% strand | P33215 |
Pockets
5 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 824 | 0.78 | 0.82 | 71 | empty |
| 2 | 130 | 0.40 | 0.74 | 22 | empty |
| 3 | 76 | 0.39 | 0.77 | 15 | empty |
| 4 | 55 | 0.33 | 0.77 | 12 | empty |
| 5 | 50 | 0.26 | 0.74 | 12 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P33215
- Elsewhere: UniProt P33215 · AlphaFold DB P33215
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