Research workbench
AlphaFold monomer V2.0 prediction for neurabin-1 (Q9ULJ8)
Analyse AlphaFold monomer V2.0 prediction for neurabin-1 (Q9ULJ8) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9ULJ8
- Type
- protein
- Length
- 1,098 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x651207d00689D88967A8252c7789431a4434F46a
- Molecule
- Neurabin-1
- UniProt
- Q9ULJ8
- Pockets
- 4 · best druggability 0.47
Structure
1 distinct chain · 31% helix, 5% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Neurabin-1 | protein | 1098 | 31% helix, 5% strand | Q9ULJ8 |
Pockets
4 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 152 | 0.47 | 0.77 | 26 | empty |
| 2 | 103 | 0.37 | 0.74 | 19 | empty |
| 3 | 110 | 0.34 | 0.72 | 18 | empty |
| 4 | 98 | 0.32 | 0.72 | 14 | empty |
Compared structures
- 1WF8 · Solution structure of the PDZ domain of Spinophilin/NeurabinII protein · an experimental structure of the same protein · chain A against A, TM-score 0.09
- 1WF8 · Solution structure of the PDZ domain of SPINOPHILIN/NEURABINII protein · an experimental structure of the same protein · chain A against A, TM-score 0.09
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9ULJ8
- Elsewhere: UniProt Q9ULJ8 · AlphaFold DB Q9ULJ8
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