Research workbench
AlphaFold monomer V2.0 prediction for NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10 (Q02373)
Analyse AlphaFold monomer V2.0 prediction for NADH dehydrogenase [ubiquinone] 1 beta… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q02373
- Type
- protein
- Length
- 176 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x4d07E6a23DeB6B95bd9b90EcB67368b7e8D3B77e
- Molecule
- NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10
- UniProt
- Q02373
- Pockets
- 1 · best druggability 0.40
Structure
1 distinct chain · 65% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10 | protein | 176 | 65% helix, 0% strand | Q02373 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 103 | 0.40 | 0.76 | 17 | empty |
Modifications
Observed in the structure: 2 disulfide (disulfide).
Compared structures
- 8Q48 · Outward-facing, closed proteoliposome complex I at 2.5 A. Initially purified in LMNG. · an experimental structure of the same protein · chain A against p, TM-score 0.98
- 8Q49 · Outward-facing, open2 proteoliposome complex I at 2.6 A. Initially purified in LMNG. · an experimental structure of the same protein · chain A against p, TM-score 0.98
- 8Q4A · Outward-facing, open1 proteoliposome complex I at 2.6 A. Initially purified in LMNG. · an experimental structure of the same protein · chain A against p, TM-score 0.97
- 8Q46 · Inward-facing, open2 proteoliposome complex I at 2.6 A. Initially purified in LMNG. · an experimental structure of the same protein · chain A against p, TM-score 0.97
- 8Q0O · Outward-facing, open2 proteoliposome complex I at 3.1 A. Initially purified in DDM. · an experimental structure of the same protein · chain A against p, TM-score 0.97
- 8Q0M · Outward-facing, closed proteoliposome complex I at 3.1 A. Initially purified in DDM. · an experimental structure of the same protein · chain A against p, TM-score 0.97
- 8Q45 · Inward-facing, closed proteoliposome complex I at 2.7 A. Initially purified in LMNG. · an experimental structure of the same protein · chain A against p, TM-score 0.97
- 8Q1Y · Outward-facing, open2 proteoliposome complex I at 2.6 A, after deactivation treatment.… · an experimental structure of the same protein · chain A against p, TM-score 0.97
- 8Q25 · Outward-facing, open1 proteoliposome complex I at 2.8 A, after deactivation treatment.… · an experimental structure of the same protein · chain A against p, TM-score 0.97
- 7QSK · Bovine complex I in lipid nanodisc, Active-Q10 · an experimental structure of the same protein · chain A against p, TM-score 0.97
- 7QSK · Bovine complex I in lipid nanodisc, active-Q10 · an experimental structure of the same protein · chain A against p, TM-score 0.97
- 7QSM · Bovine complex I in lipid nanodisc, deactive-ligand (composite) · an experimental structure of the same protein · chain A against p, TM-score 0.97
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q02373
- Elsewhere: UniProt Q02373 · AlphaFold DB Q02373
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