Research workbench
AlphaFold monomer V2.0 prediction for NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 (Q9Y6M9)
Analyse AlphaFold monomer V2.0 prediction for NADH dehydrogenase [ubiquinone] 1 beta… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9Y6M9
- Type
- protein
- Length
- 179 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xA35a3d2F3CD94d1eAB5DE310bC45150DB5ad0e80
- Molecule
- NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9
- UniProt
- Q9Y6M9
- Pockets
- 2 · best druggability 0.66
Structure
1 distinct chain · 55% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 | protein | 179 | 55% helix, 0% strand | Q9Y6M9 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 317 | 0.66 | 0.81 | 30 | empty |
| 2 | 159 | 0.43 | 0.74 | 20 | empty |
Compared structures
- 5XTC · Cryo-EM structure of human respiratory complex I transmembrane arm · an experimental structure of the same protein · chain A against p, TM-score 0.94
- 5XTC · Cryo-EM structure of human respiratory complex I transmembrane arm · an experimental structure of the same protein · chain A against p, TM-score 0.94
- 5XTD · Cryo-EM structure of human respiratory complex I · an experimental structure of the same protein · chain A against p, TM-score 0.94
- 5XTD · Cryo-EM structure of human respiratory complex I · an experimental structure of the same protein · chain A against p, TM-score 0.94
- 5XTI · Cryo-EM architecture of human respiratory chain megacomplex-I2III2IV2 · an experimental structure of the same protein · chain A against Bp, TM-score 0.94
- 5XTH · Cryo-EM structure of human respiratory supercomplex I1III2IV1 · an experimental structure of the same protein · chain A against p, TM-score 0.94
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9Y6M9
- Elsewhere: UniProt Q9Y6M9 · AlphaFold DB Q9Y6M9
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